the plots generated by interactive plots (%matplotlib notebook) do
not show up in the PDF. This has meant that I haven't been able to
update the PDF since febuary. I switched the default plotting
mechanism to noninteractive.
This is just so everything looks nice in nbviewer. I added
plt.tight_layout() to the interactive_plot context manager,
which makes plots fill the output cell better.
Using %matplotlib notebook to render plots.
I made the g-h filter chapter work. There is a very good chance
I broke the other chapters. Need to push to really find out.
All my code in this chapter hard coded the computation of the
likelihood inside the update() function, where it had no business.
Also, my treatment of the likelihood was rather hand wavey. By
pulling it out of update() and maing it explicit I have created
a firm foundation for the rest of the book.
Changed default sizes of plots, changed the book template for
pdf creation, and lots of minor edits, most changing bold to
italic, and removing italic for emphasis.
This code did not work for Python 2.x becaus I was not
importing from future. While I was altering all the files
I updated the header to include license information.
I had a lot of problems with lines being visible, and ended up
using different styles in different places. I found a style that
seems to work everywhere and put the code in book_plots.py.
