Altered PDF generation.

Added code to inject \appendix to the first appendix notebook
so that they are properly labelled. Started g-h chapter as chapter
one. There is probably a lot more I want to do now that I have
the basic idea of how to inject latex into the files before creating
the PDF, but this is a good start.

.gitignore

@@ -1,3 +1,6 @@
+# test document not for distribution
+short.pdf
+
 # Byte-compiled / optimized / DLL files
 __pycache__/
 *.py[cod]

Appendix_A_Installation/Appendix_Installation.ipynb

@@ -20,7 +20,7 @@
      "level": 1,
      "metadata": {},
      "source": [
-      "Appendix: Installation, Python, Numpy, and filterpy"
+      "Installation, Python, Numpy, and filterpy"
      ]
     },
     {

Appendix_B_Symbols_and_Notations/Appendix_Symbols_and_Notations.ipynb

@@ -1,7 +1,7 @@
 {
  "metadata": {
   "name": "",
-  "signature": "sha256:96b8d49070c26012f68e9c586fe5de841f9bf752ab9ecd8bd8c787afa0086ad3"
+  "signature": "sha256:53bdd4d227576a358de986c4a5ec6cf238e76c88031dc1b6d55f06ce9fc5c11b"
  },
  "nbformat": 3,
  "nbformat_minor": 0,
@@ -262,7 +262,7 @@
      "level": 1,
      "metadata": {},
      "source": [
-      "Appendix I : Symbology"
+      "Symbology"
      ]
     },
     {

clean_book

@@ -8,6 +8,8 @@ rm --f ./*_files/*.png
 rm --f Kalman_and_Bayesian_Filters_in_Python.ipynb
 rm --f Kalman_and_Bayesian_Filters_in_Python.toc
 rm --f Kalman_and_Bayesian_Filters_in_Python.tex
+rm --f short.ipynb
+
 rmdir  ./*_files/ 2> /dev/null
 
 if (( $# == 1)); then

clean_book.sh

@@ -1,17 +0,0 @@
-#! /bin/bash
-rm --f *.tex
-rm --f *.toc
-rm --f *.aux
-rm --f *.log
-rm --f *.out
-rm --f ./*_files/*.png
-rm --f Kalman_and_Bayesian_Filters_in_Python.ipynb
-rm --f Kalman_and_Bayesian_Filters_in_Python.toc
-rm --f Kalman_and_Bayesian_Filters_in_Python.tex
-rmdir  ./*_files/ 2> /dev/null
-
-if (( $# == 1)); then
-  if [ "@1" == all ]; then
-    rm Kalman_and_Bayesian_Filters_in_Python.pdf;
-  fi 
-fi

merge_book.py

@@ -3,6 +3,7 @@ import io
 from IPython.nbformat import current
 import sys
 
+
 def remove_formatting(nb):
     w = nb['worksheets']
     node = w[0]
@@ -13,6 +14,7 @@ def remove_formatting(nb):
                 del c[i]
                 return
 
+
 def remove_links(nb):
     w = nb['worksheets']
     node = w[0]
@@ -23,13 +25,30 @@ def remove_links(nb):
                 del c[i]
                 return
 
+
+def remove_links_add_appendix(nb):
+    w = nb['worksheets']
+    node = w[0]
+    c = node['cells']
+    for i in range (len(c)):
+        if 'source' in c[i].keys():
+            if c[i]['source'][0:19] == '[Table of Contents]':
+                c[i]['source'] = '\\appendix'
+                return
+
+
 def merge_notebooks(filenames):
     merged = None
+    added_appendix = False
     for fname in filenames:
         with io.open(fname, 'r', encoding='utf-8') as f:
             nb = current.read(f, u'json')
             remove_formatting(nb)
-            remove_links(nb)
+            if not added_appendix and fname[0:8] == 'Appendix':
+                remove_links_add_appendix(nb)
+                added_appendix = True
+            else:
+                remove_links(nb)
         if merged is None:
             merged = nb
         else:

report.tplx

@@ -19,4 +19,5 @@
 
 ((* block docclass *))
 \documentclass[4pt]{book}
+\setcounter{chapter}{-1}
 ((* endblock docclass *))

short_build_book

@@ -0,0 +1,11 @@
+#! /bin/bash
+
+echo "merging book..."
+
+python short_merge_book.py > short.ipynb
+
+echo "creating pdf..."
+ipython nbconvert --to latex --template book --post PDF short.ipynb
+
+echo "done."
+

short_merge_book.py

@@ -0,0 +1,65 @@
+from __future__ import print_function
+import io
+from IPython.nbformat import current
+import sys
+
+def remove_formatting(nb):
+    w = nb['worksheets']
+    node = w[0]
+    c = node['cells']
+    for i in range (len(c)):
+        if 'input' in c[i].keys():
+            if c[i]['input'][0:16] == '#format the book':
+                del c[i]
+                return
+
+def remove_links(nb):
+    w = nb['worksheets']
+    node = w[0]
+    c = node['cells']
+    for i in range (len(c)):
+        if 'source' in c[i].keys():
+            if c[i]['source'][0:19] == '[Table of Contents]':
+                del c[i]
+                return
+
+def remove_links_add_appendix(nb):
+    w = nb['worksheets']
+    node = w[0]
+    c = node['cells']
+    for i in range (len(c)):
+        if 'source' in c[i].keys():
+            if c[i]['source'][0:19] == '[Table of Contents]':
+                c[i]['source'] = '\\appendix'
+                return
+
+
+def merge_notebooks(filenames):
+    merged = None
+    added_appendix = False
+    for fname in filenames:
+        with io.open(fname, 'r', encoding='utf-8') as f:
+            nb = current.read(f, u'json')
+            remove_formatting(nb)
+            if not added_appendix and fname[0:8] == 'Appendix':
+                remove_links_add_appendix(nb)
+                added_appendix = True
+            else:
+                remove_links(nb)
+        if merged is None:
+            merged = nb
+        else:
+            merged.worksheets[0].cells.extend(nb.worksheets[0].cells)
+    merged.metadata.name += "_merged"
+
+    print(current.writes(merged, u'json'))
+
+
+if __name__ == '__main__':
+    #merge_notebooks(sys.argv[1:])
+    merge_notebooks(
+        ['Preface.ipynb',
+         '01_gh_filter/g-h_filter.ipynb',
+         '02_Discrete_Bayes/discrete_bayes.ipynb',
+         'Appendix_A_Installation/Appendix_Installation.ipynb',
+         'Appendix_B_Symbols_and_Notations/Appendix_Symbols_and_Notations.ipynb'])