* Create .python-version * Create .gitignore * Create Makefile * remove Dockerfile * remove docker workflow * startup.sh * devcontainer * README with link * Update Makefile * obsolete python-version * Update README.md * Update README.md * Update README.md * Update devcontainer.json no browser option for devContainer * introducing a first test * introducing a first test * introducing a manual release job * introducing a manual release job * Update README.md --------- Co-authored-by: Jonathan Taylor <jonathan.taylor@stanford.edu>
60 lines
1.5 KiB
YAML
60 lines
1.5 KiB
YAML
# testing all notebooks
|
|
name: TEST
|
|
|
|
on:
|
|
- push
|
|
|
|
jobs:
|
|
test:
|
|
runs-on: ubuntu-latest
|
|
|
|
strategy:
|
|
matrix:
|
|
python-version: ['3.11', '3.12']
|
|
#notebook: [ Ch02-statlearn-lab.ipynb ]. # Ch02 is tricky but we have a solution for it
|
|
notebook: [ Ch03-linreg-lab.ipynb ]
|
|
# Ch04-classification-lab.ipynb,
|
|
# Ch05-resample-lab.ipynb,
|
|
# Ch06-varselect-lab.ipynb,
|
|
# Ch07-nonlin-lab.ipynb,
|
|
# Ch08-baggboost-lab.ipynb,
|
|
# Ch09-svm-lab.ipynb,
|
|
# Ch10-deeplearning-lab.ipynb,
|
|
# Ch11-surv-lab.ipynb,
|
|
# Ch12-unsup-lab.ipynb,
|
|
# Ch13-multiple-lab.ipynb]
|
|
#exclude:
|
|
# - python-version: '3.11'
|
|
# notebook: Ch10-deeplearning-lab.ipynb
|
|
|
|
fail-fast: false
|
|
|
|
steps:
|
|
- uses: actions/checkout@v4
|
|
|
|
- name: Install uv
|
|
uses: astral-sh/setup-uv@v5
|
|
#with:
|
|
# version: "0.5.15"
|
|
|
|
|
|
#- name: Set up Python
|
|
# shell: bash
|
|
# run: |
|
|
# uv python install ${{ matrix.python-version }}
|
|
|
|
- name: Create venv
|
|
shell: bash
|
|
run: uv venv --python ${{ matrix.python-version }}
|
|
|
|
- name: Install requirements
|
|
shell: bash
|
|
run: |
|
|
uv pip install --upgrade pip
|
|
uv pip install -r requirements.txt
|
|
uv pip install pytest nbmake
|
|
|
|
- name: Test
|
|
shell: bash
|
|
run: |
|
|
uv run pytest --nbmake --nbmake-timeout=3600 -vv ${{ matrix.notebook }} |